Dr James Carolan

Biography
Research Interests
Peer Reviewed Journals
Year | Publication | |
---|---|---|
2022 | 'Global protein responses of multidrug resistance plasmid-containing Escherichia coli to ampicillin, cefotaxime, imipenem and ciprofloxacin'
Anatte Margalit and James C. Carolan and Fiona Walsh (2022) 'Global protein responses of multidrug resistance plasmid-containing Escherichia coli to ampicillin, cefotaxime, imipenem and ciprofloxacin'. Journal of Global Antimicrobial Resistance, 28 :90-96 [DOI] [Details] |
|
2022 | 'Exposure to the Pseudomonas aeruginosa secretome alters the proteome and secondary metabolite production of Aspergillus fumigatus'
Margalit A;Sheehan D;Carolan JC;Kavanagh K; (2022) 'Exposure to the Pseudomonas aeruginosa secretome alters the proteome and secondary metabolite production of Aspergillus fumigatus'. Microbiology - Society for General Microbiology, 168 (3) [DOI] [Details] |
|
2021 | 'Bacterial Interactions with Aspergillus fumigatus in the Immunocompromised Lung'
Margalit, Anatte,Carolan, James C,Kavanagh, Kevin (2021) 'Bacterial Interactions with Aspergillus fumigatus in the Immunocompromised Lung'. Microorganisms, 9 (2) [Details] |
|
2021 | 'Simultaneous determination of pesticides from soils: A comparison between QuEChERS extraction and Dutch mini-Luke extraction methods'
Vickneswaran M.;Carolan J.C.;White B. (2021) 'Simultaneous determination of pesticides from soils: A comparison between QuEChERS extraction and Dutch mini-Luke extraction methods'. Analytical Methods, 13 (46):5638-5650 [DOI] [Details] |
|
2021 | 'Genome sequence of the English grain aphid, Sitobion avenae and its endosymbiont Buchnera aphidicola'
Byrne, Stephen and Schughart, Maximilian and Carolan, James C and Gaffney, Michael and Thorpe, Peter J and Malloch, Gaynor and Wilkinson, Tom and McNamara, Louise (2021) 'Genome sequence of the English grain aphid, Sitobion avenae and its endosymbiont Buchnera aphidicola'. G3 Genes|Genomes|Genetics, [DOI] [Details] |
|
2020 | 'Phylogenetics of Taxus using the internal transcribed spacers of nuclear ribosomal DNA and plastid trnL-F regions'
Coughlan P.;Carolan J.C.;Hook I.L.I.;Kilmartin L.;Hodkinson T.R. (2020) 'Phylogenetics of Taxus using the internal transcribed spacers of nuclear ribosomal DNA and plastid trnL-F regions'. Horticulturae, 6 (1) [DOI] [full-text] [Details] |
|
2020 | 'The Aspergillus fumigatus Secretome Alters the Proteome of Pseudomonas aeruginosa to Stimulate Bacterial Growth: Implications for Co-infection'
Margalit A.;Carolan J.C.;Sheehan D.;Kavanagh K. (2020) 'The Aspergillus fumigatus Secretome Alters the Proteome of Pseudomonas aeruginosa to Stimulate Bacterial Growth: Implications for Co-infection'. Molecular and Cellular Proteomics, 19 (8):1346-1359 [DOI] [full-text] [Details] |
|
2019 | 'Infection by the castrating parasitic nematode Sphaerularia bombi changes gene expression in Bombus terrestris bumblebee queens'
Colgan, TJ;Carolan, JC;Sumner, S;Blaxter, ML;Brown, MJF (2019) 'Infection by the castrating parasitic nematode Sphaerularia bombi changes gene expression in Bombus terrestris bumblebee queens'. Insect Molecular Biology, [DOI] [full-text] [Details] |
|
2020 | 'In silico Characterization of a Candidate Protein from Aphid Gelling Saliva with Potential for Aphid Control in Plants'
Khan, R,S,A., Ali, Z., Niazi, A.K., Carolan, J.C., Wilkinson, T (2020) 'In silico Characterization of a Candidate Protein from Aphid Gelling Saliva with Potential for Aphid Control in Plants'. Protein and Peptide Letters, [DOI] [Details] |
|
2019 | 'Exposure to microplastics reduces attachment strength and alters the haemolymph proteome of blue mussels (Mytilus edulis)'
Green D.;Colgan T.;Thompson R.;Carolan J. (2019) 'Exposure to microplastics reduces attachment strength and alters the haemolymph proteome of blue mussels (Mytilus edulis)'. Environmental Pollution, 246 :423-434 [DOI] [full-text] [Details] |
|
2019 | 'The salivary gland proteome of root-galling grape phylloxera (Daktulosphaira vitifoliae Fitch) feeding on Vitis spp'
Eitle MW;Carolan JC;Griesser M;Forneck A; (2019) 'The salivary gland proteome of root-galling grape phylloxera (Daktulosphaira vitifoliae Fitch) feeding on Vitis spp'. PLoS ONE, 14 (12) [DOI] [full-text] [Details] |
|
2019 | 'The role of the liver in the migration of parasites of global significance'
Deslyper G;Doherty DG;Carolan JC;Holland CV; (2019) 'The role of the liver in the migration of parasites of global significance'. Parasites and Vectors, 12 (1) [DOI] [full-text] [Details] |
|
2019 | 'Mating precedes selective immune priming which is maintained throughout bumblebee queen diapause'
Colgan TJ;Finlay S;Brown MJF;Carolan JC; (2019) 'Mating precedes selective immune priming which is maintained throughout bumblebee queen diapause'. BMC Genomics, 20 (1) [DOI] [full-text] [Details] |
|
2019 | 'Molecular characterization of Hydrellia lagarosiphon, a leaf mining biological control agent for Lagarosiphon major, reveals weak variance across large geographic areas in South Africa'
Mangan R.;Carolan J.;Baars J. (2019) 'Molecular characterization of Hydrellia lagarosiphon, a leaf mining biological control agent for Lagarosiphon major, reveals weak variance across large geographic areas in South Africa'. Biological Control, 132 :8-15 [DOI] [full-text] [Details] |
|
2019 | 'The liver proteome in a mouse model for Ascaris suum resistance and susceptibility: evidence for an altered innate immune response'
Deslyper G;Holland CV;Colgan TJ;Carolan JC; (2019) 'The liver proteome in a mouse model for Ascaris suum resistance and susceptibility: evidence for an altered innate immune response'. Parasites and Vectors, 12 (1) [DOI] [full-text] [Details] |
|
2019 | 'Characterization of the proteomic response of A549 cells following sequential exposure to Aspergillus fumigatus and Pseudomonas aeruginosa'
Margalit A;Kavanagh K;Carolan JC; (2019) 'Characterization of the proteomic response of A549 cells following sequential exposure to Aspergillus fumigatus and Pseudomonas aeruginosa'. Journal of Proteome Research, 19 (1):279-291 [DOI] [full-text] [Details] |
|
2019 | 'Fungicides, herbicides and bees: A systematic review of existing research and methods'
Cullen MG;Thompson LJ;Carolan JC;Stout JC;Stanley DA; (2019) 'Fungicides, herbicides and bees: A systematic review of existing research and methods'. PLoS ONE, 14 (12) [DOI] [full-text] [Details] |
|
2018 | 'The effect of entomopathogenic fungal culture filtrate on the immune response and haemolymph proteome of the large pine weevil, Hylobius abietis'
Namara LM;Griffin CT;Fitzpatrick D;Kavanagh K;Carolan JC; (2018) 'The effect of entomopathogenic fungal culture filtrate on the immune response and haemolymph proteome of the large pine weevil, Hylobius abietis'. Insect Biochemistry and Molecular Biology, [DOI] [full-text] [Details] |
|
2018 | 'Quantitative proteomics reveals divergent responses in Apis mellifera worker and drone pupae to parasitization by Varroa destructor'
Carla Surlis and James C. Carolan and Mary Coffey and Kevin Kavanagh (2018) 'Quantitative proteomics reveals divergent responses in Apis mellifera worker and drone pupae to parasitization by Varroa destructor'. Journal of Insect Physiology, 107 :291-301 [DOI] [Details] |
|
2018 | 'Fast evolution and lineage-specific gene family expansions of aphid salivary effectors driven by interactions with host-plants'
Boulain H.;Legeai F.;Guy E.;Morlière S.;Douglas N.;Oh J.;Murugan M.;Smith M.;Jaquiéry J.;Peccoud J.;White F.;Carolan J.;Simon J.;Sugio A. (2018) 'Fast evolution and lineage-specific gene family expansions of aphid salivary effectors driven by interactions with host-plants'. Genome Biology and Evolution, 10 (6):1554-1572 [DOI] [full-text] [Details] |
|
2018 | 'Bumblebees of the Azores (Apidae: Bombus)'
Oliver E. Prŷs-Jones and Paul H. Williams and James C. Carolan (2018) 'Bumblebees of the Azores (Apidae: Bombus)'. Journal of Natural History, 52 (5-6):345-349 [DOI] [full-text] [Details] |
|
2017 | 'The effect of entomopathogenic fungal culture filtrate on the immune response of the greater wax moth, Galleria mellonella'
Mc Namara, L;Carolan, JC;Griffin, CT;Fitzpatrick, D;Kavanagh, K (2017) 'The effect of entomopathogenic fungal culture filtrate on the immune response of the greater wax moth, Galleria mellonella'. Journal of Insect Physiology, 100 :82-92 [DOI] [full-text] [Details] |
|
2016 | 'Proteomic analysis of Bayvarol® resistance mechanisms in the honey bee parasite Varroa destructor'
Surlis C.;Carolan J.;Coffey M.;Kavanagh K. (2016) 'Proteomic analysis of Bayvarol® resistance mechanisms in the honey bee parasite Varroa destructor'. Journal of Apicultural Research, :1-16 [DOI] [full-text] [Details] |
|
2016 | 'A Proteomic Investigation of Hepatic Resistance to Ascaris in a Murine Model'
Deslyper G;Colgan TJ;Cooper AJ;Holland CV;Carolan JC; (2016) 'A Proteomic Investigation of Hepatic Resistance to Ascaris in a Murine Model'. PLoS Neglected Tropical Diseases, 10 (8) [DOI] [full-text] [Details] |
|
2015 | 'A Massive Expansion of Effector Genes Underlies Gall-Formation in the Wheat Pest Mayetiola destructor'
Zhao, CY;Escalante, LN;Chen, H;Benatti, TR;Qu, JX;Chellapilla, S;Waterhouse, RM;Wheeler, D;Andersson, MN;Bao, RY;Batterton, M;Behura, SK;Blankenburg, KP;Caragea, D;Carolan, JC;Coyle, M;El-Bouhssini, M;Francisco, L;Friedrich, M;Gill, N;Grace, T;Grimmelikhuijzen, CJP;Han, Y;Hauser, F;Herndon, N;Holder, M;Ioannidis, P;Jackson, L;Javaid, M;Jhangiani, SN;Johnson, AJ;Kalra, D;Korchina, V;Kovar, CL;Lara, F;Lee, SL;Liu, XM;Lofstedt, C;Mata, R;Mathew, T;Muzny, DM;Nagar, S;Nazareth, LV;Okwuonu, G;Ongeri, F;Perales, L;Peterson, BF;Pu, LL;Robertson, HM;Schemerhorn, BJ;Scherer, SE;Shreve, JT;Simmons, D;Subramanyam, S;Thornton, RL;Xue, K;Weissenberger, GM;Williams, CE;Worley, KC;Zhu, DH;Zhu, YM;Harris, MO;Shukle, RH;Werren, JH;Zdobnov, EM;Chen, MS;Brown, SJ;Stuart, JJ;Richards, S (2015) 'A Massive Expansion of Effector Genes Underlies Gall-Formation in the Wheat Pest Mayetiola destructor'. Current Biology, 25 :613-620 [DOI] [full-text] [Details] |
|
2015 | 'A depauperate immune repertoire precedes evolution of sociality in bees. Genome Biology, 16, 83'
Barribeau, SM, Sadd, BM, du Plessis, L, Brown, MJF, Buechel, SD, Cappelle, K, Carolan, JC et al. (2015) 'A depauperate immune repertoire precedes evolution of sociality in bees. Genome Biology, 16, 83'. Genome Biology, 16 [DOI] [full-text] [Details] |
|
2015 | 'Prolonged pre-incubation increases the susceptibility of Galleria mellonella larvae to bacterial and fungal infection'
Browne, N;Surlis, C;Maher, A;Gallagher, C;Carolan, JC;Clynes, M;Kavanagh, K (2015) 'Prolonged pre-incubation increases the susceptibility of Galleria mellonella larvae to bacterial and fungal infection'. Virulence, 6 :458-465 [DOI] [full-text] [Details] |
|
2015 | 'The genomes of two key bumblebee species with primitive eusocial organization. Genome Biology'
The International Bumblebee Genomics Consortium (2015). Sadd B., et al., including Carolan, J.C. (2015) 'The genomes of two key bumblebee species with primitive eusocial organization. Genome Biology'. Genome Biology, 16 [DOI] [full-text] [Details] |
|
2015 | 'Revealing the hidden niches of cryptic bumblebees in Great Britain: Implications for conservation'
Scriven, JJ;Woodall, LC;Tinsley, MC;Knight, MIE;Williams, PH;Carolan, JC;Brown, MJF;Goulson, D (2015) 'Revealing the hidden niches of cryptic bumblebees in Great Britain: Implications for conservation'. Biological Conservation, 182 :126-133 [DOI] [full-text] [Details] |
|
2013 | 'Proteomic Profiling of Cereal Aphid Saliva Reveals Both Ubiquitous and Adaptive Secreted Proteins'
Rao S.;Carolan J.;Wilkinson T. (2013) 'Proteomic Profiling of Cereal Aphid Saliva Reveals Both Ubiquitous and Adaptive Secreted Proteins'. PLoS ONE, 8 (2) [DOI] [full-text] [Details] |
|
2012 | 'Cryptic Bumblebee Species: Consequences for Conservation and the Trade in Greenhouse Pollinators'
Williams, PH;An, JD;Brown, MJF;Carolan, JC;Goulson, D;Huang, JX;Ito, M (2012) 'Cryptic Bumblebee Species: Consequences for Conservation and the Trade in Greenhouse Pollinators'. PLoS ONE, 7 [DOI] [full-text] [Details] |
|
2012 | 'Colour Patterns Do Not Diagnose Species: Quantitative Evaluation of a DNA Barcoded Cryptic Bumblebee Complex'
Carolan, JC;Murray, TE;Fitzpatrick, U;Crossley, J;Schmidt, H;Cederberg, B;McNally, L;Paxton, RJ;Williams, PH;Brown, MJF (2012) 'Colour Patterns Do Not Diagnose Species: Quantitative Evaluation of a DNA Barcoded Cryptic Bumblebee Complex'. PLoS ONE, 7 [DOI] [full-text] [Details] |
|
2011 | 'Polyphenism in social insects: insights from a transcriptome-wide analysis of gene expression in the life stages of the key pollinator, Bombus terrestris'
Colgan, TJ;Carolan, JC;Bridgett, SJ;Sumner, S;Blaxter, ML;Brown, MJF (2011) 'Polyphenism in social insects: insights from a transcriptome-wide analysis of gene expression in the life stages of the key pollinator, Bombus terrestris'. BMC Genomics, 12 [DOI] [full-text] [Details] |
|
2011 | 'Predicted effector molecules in the salivary secretome of the pea aphid (Acyrthosiphon pisum) – a dual transcriptomic/proteomic approach'
Carolan, J.C., Caragea, D., Reardon, K.T., Mutti, N.S., Pappan, K., Dittmer, N, Cui, F., Reeck, G.R, Castaneto, M., Poulain, J., Dossat, C., Wilkinson, T.L., Tagu, D., Reese, J.C. and Edwards, O.R. (2011) 'Predicted effector molecules in the salivary secretome of the pea aphid (Acyrthosiphon pisum) – a dual transcriptomic/proteomic approach'. Journal of Proteome Research, 10 :1505-1518 [DOI] [full-text] [Details] |
|
2010 | 'Genome Sequence of the Pea Aphid Acyrthosiphon pisum'
International Aphid Genomics Consortium (including Carolan, J.C.) (2010) 'Genome Sequence of the Pea Aphid Acyrthosiphon pisum'. PLoS Biology, 8 [DOI] [full-text] [Details] |
|
2010 | 'Integrated metabonomic-proteomic analysis of an insect-bacterial symbiotic system'
Wang, Y., Carolan, J.C.*., Hao, F-H., Nicholson, J., Wilkinson, T.L. & Douglas, A.E. (2010) 'Integrated metabonomic-proteomic analysis of an insect-bacterial symbiotic system'. Journal of Proteome Research, 9 :1257-1267 [full-text] [Details] |
|
2009 | 'Isolation and characterisation of a cathepsin L gene from Strongylus vulgaris'
Nic An Ultaigh, S., Carolan, J.C., Britton, C., Murray, L. & Ryan, M.F (2009) 'Isolation and characterisation of a cathepsin L gene from Strongylus vulgaris'. Experimental Parasitology, 121 :293-299 [full-text] [Details] |
|
2009 | 'The secreted salivary proteome of the pea aphid Acyrthosiphon pisum characterised by mass spectrometry'
Carolan J.;Fitzroy C.;Ashton P.;Douglas A.;Wilkinsonl T. (2009) 'The secreted salivary proteome of the pea aphid Acyrthosiphon pisum characterised by mass spectrometry'. Proteomics, 9 (9):2457-2467 [DOI] [full-text] [Details] |
|
2006 | 'Phylogenetics of Papaver and related genera based on DNA sequences from ITS nuclear ribosomal DNA and plastid trnL intron and trnL–F intergenic Spacers'
Carolan, J.C., Hook, I.L.I., Chase, M.W., Kadereit, J.W. & Hodkinson, T.R. (2006) 'Phylogenetics of Papaver and related genera based on DNA sequences from ITS nuclear ribosomal DNA and plastid trnL intron and trnL–F intergenic Spacers'. Annals of Botany, 98 :141-155 [full-text] [Details] |
|
2005 | 'A proteomics approach to identify key components of aphid saliva'
Carolan, J.C. &Wilkinson.T.L. (2005) 'A proteomics approach to identify key components of aphid saliva'. Comparative Biochemistry and Physiology, 141 :S225-S236 [Details] |
|
2002 | 'Using AFLP markers for species differentiation and assessment of genetic variability of in vitro-cultured Papaver bracteatum (section Oxytona)'
Carolan J.C., Hook, , I.L.I., Walsh, J.J. & Hodkinson, T.R. (2002) 'Using AFLP markers for species differentiation and assessment of genetic variability of in vitro-cultured Papaver bracteatum (section Oxytona)'. IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY, 38 :300-307 [full-text] [Details] |
Reviews
Year | Publication | |
---|---|---|
2012 | Unveiling cryptic species of the bumblebee subgenus Bombus s. str. worldwide with COI barcodes (Hymenoptera: Apidae).
Williams P.;Brown M.;Carolan J.;An J.;Goulson D.;Aytekin A.;Best L.;Byvaltsev A.;Cederberg B.;Dawson R.;Huang J.;Ito M.;Monfared A.;Raina R.;Schmid-Hempel P.;Sheffield C.;Å ima P.;Xie Z. (2012) Unveiling cryptic species of the bumblebee subgenus Bombus s. str. worldwide with COI barcodes (Hymenoptera: Apidae). Reviews [DOI] [full-text] [Details] |
Book Chapters
Year | Publication | |
---|---|---|
2016 | 'Proteomic Insights into the Hidden World of Phloem Sap Feeding'
Rao S.A., Carolan J.C.*, Wilkinson, T.L (2016) 'Proteomic Insights into the Hidden World of Phloem Sap Feeding' In: Management of Insect Pests to Agriculture. Springer International Publishing. [DOI] [full-text] [Details] |
|
2012 | 'Breaching the Sieve Element-The Role of Saliva as the Molecular Interface Between Aphids and the Phloem'
Will T.;Carolan J.;Wilkinson T. (2012) 'Breaching the Sieve Element-The Role of Saliva as the Molecular Interface Between Aphids and the Phloem' In: Phloem: Molecular Cell Biology, Systemic Communication, Biotic Interactions. [DOI] [full-text] [Details] |
|
2012 | 'Molecular interactions between aphids and host plants'
Will, T., Carolan J.C. and Wilkinson, T.L. (2012) 'Molecular interactions between aphids and host plants' In: Phloem: Molecular Cell Biology, Systemic Communication, Biotic Interactions. Wiley-Blackwell. [DOI] [Details] |
Conference Contributions
Year | Publication | |
---|---|---|
2018 | Biodiversity Mapping for Maynooth University using OpenStreetMap.
McLoughlin, M.; Casey, E.; Timoney, J.; Carolan, J.; Seaman, S.; and Maher, A.; (2018) Biodiversity Mapping for Maynooth University using OpenStreetMap. [Oral Presentation], Second Irish OSGeo Symposium 2018, Portlaoise, Ireland [Details] |